Gene Function Prediction/ANNOTATOR Group
Head of Division

Senior Principal Investigator
Group Members
Dr. EISENHABER FrankPrincipal Investigator
Dr. EISENHABER Birgit Principal Investigator
Dr. SIROTA Fernanda L.Postdoctoral Fellow
Dr. SINHA SwatiPostdoctoral Fellow
Mr. LIM Chun TeckResearch Officer
Research Overview

Our group is developing an advanced tool for functional characterization of sequences and strives to establish the ANNOTATOR software environment as the de-facto standard in this field. The scope of work includes the integration of established algorithms as well as research into novel heuristics for tracing distant evolutionary relationships. Due to the complex nature of such heuristics, it is necessary to additionally consider aspects of high performance and distributed computing.
More Details

Selected Publications
  1. Maurer-Stroh S, Koranda M, Benetka W, Schneider G, Sirota FL, Eisenhaber F.
    Towards complete sets of farnesylated and geranylgeranylated proteins.
    PLoS Comput Biol. 2007 Apr 6;3(4):e66. Epub 2007 Feb 23.
    PMID: 17411337 [PubMed - indexed for MEDLINE]

  2. Neuberger G, Schneider G, Eisenhaber F.
    pkaPS: prediction of protein kinase A phosphorylation sites with the simplified kinase-substrate binding model.
    Biol Direct. 2007 Jan 12;2:1.
    PMID: 17222345 [PubMed]

  3. Schneider G, Neuberger G, Wildpaner M, Tian S, Berezovsky I, Eisenhaber F.
    Application of a sensitive collection heuristic for very large protein families: evolutionary relationship between adipose triglyceride lipase (ATGL) and classic mammalian lipases.
    BMC Bioinformatics. 2006 Mar 21;7:164.
    PMID: 16551354 [PubMed - indexed for MEDLINE]
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